DemographicExposure API Reference¶
pycomptox.exposure.demographicexposure.DemographicExposure
¶
Bases: CachedAPIClient
Client for accessing demographic-specific exposure prediction data from EPA CompTox Dashboard.
This class provides methods for retrieving demographic-specific estimates of average (geometric mean) exposure rate (mg/kg bodyweight/day) for U.S. population subgroups.
Predictions include: - Median estimates (50% confidence) - Upper 95th percentile estimates (95% confidence) - Demographic-specific predictions (age groups, etc.)
Total population predictions are based on consensus exposure model predictions and the similarity of compounds to chemicals monitored by NHANES. The demographic-specific predictions use a heuristic model described in the 2014 publication "High Throughput Heuristics for Prioritizing Human Exposure to Environmental Chemicals".
Parameters:
| Name | Type | Description | Default |
|---|---|---|---|
api_key
|
str
|
CompTox API key. If not provided, will attempt to load from saved configuration or COMPTOX_API_KEY environment variable. |
None
|
base_url
|
str
|
Base URL for the CompTox API. Defaults to EPA's endpoint. |
'https://comptox.epa.gov/ctx-api/'
|
time_delay_between_calls
|
float, **kwargs
|
Delay in seconds between API calls for rate limiting. Default is 0.0 (no delay). |
0.0
|
Example
from pycomptox import DemographicExposure demo_exp = DemographicExposure()
Get demographic exposure predictions for a chemical¶
data = demo_exp.prediction_SEEMs_data_by_dtxsid("DTXSID0020232")
Source code in src/pycomptox/exposure/demographicexposure.py
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__init__(api_key=None, base_url='https://comptox.epa.gov/ctx-api/', time_delay_between_calls=0.0, **kwargs)
¶
Initialize the DemographicExposure client.
Parameters:
| Name | Type | Description | Default |
|---|---|---|---|
api_key
|
Optional[str]
|
CompTox API key (optional, will be loaded from config if not provided) |
None
|
base_url
|
str
|
Base URL for the CompTox API |
'https://comptox.epa.gov/ctx-api/'
|
time_delay_between_calls
|
float
|
Delay between API calls in seconds |
0.0
|
Raises:
| Type | Description |
|---|---|
ValueError
|
If no API key is provided or found in configuration |
Source code in src/pycomptox/exposure/demographicexposure.py
prediction_SEEMs_data_by_dtxsid(dtxsid, projection='ccd-demographic', use_cache=None)
¶
Get demographic-specific SEEM exposure predictions for a chemical.
Retrieves Systematic Empirical Evaluation of Models (SEEM) exposure predictions broken down by demographic groups for a specific chemical identified by its DSSTox Substance Identifier (DTXSID). Returns estimates of average (geometric mean) exposure rate (mg/kg bodyweight/day) for different U.S. population subgroups.
The demographic-specific predictions use a heuristic model described in the 2014 publication "High Throughput Heuristics for Prioritizing Human Exposure to Environmental Chemicals".
Parameters:
| Name | Type | Description | Default |
|---|---|---|---|
dtxsid
|
str
|
DSSTox Substance Identifier (e.g., 'DTXSID0020232') |
required |
projection
|
str
|
Optional projection specification. Default is 'ccd-demographic'. |
'ccd-demographic'
|
Returns:
| Type | Description |
|---|---|
List[Dict[str, Any]]
|
List of dictionaries containing demographic SEEM prediction data including: |
List[Dict[str, Any]]
|
|
List[Dict[str, Any]]
|
|
List[Dict[str, Any]]
|
|
List[Dict[str, Any]]
|
|
Raises:
| Type | Description |
|---|---|
ValueError
|
If dtxsid is not a valid non-empty string |
Example
demo_exp = DemographicExposure() data = demo_exp.prediction_SEEMs_data_by_dtxsid("DTXSID0020232") for pred in data: ... print(f"{pred.get('demographic')}: {pred.get('medianEstimate')} mg/kg/day")
Source code in src/pycomptox/exposure/demographicexposure.py
prediction_SEEMs_data_by_dtxsid_batch(dtxsid_list, use_cache=None)
¶
Get demographic SEEM exposure predictions for multiple chemicals in a single request.
Retrieves demographic-specific SEEM exposure predictions for multiple chemicals at once using a batch API call. This is more efficient than making individual requests for each chemical when working with multiple DTXSIDs.
Parameters:
| Name | Type | Description | Default |
|---|---|---|---|
dtxsid_list
|
List[str]
|
List of DSSTox Substance Identifiers |
required |
Returns:
| Type | Description |
|---|---|
List[Dict[str, Any]]
|
List of dictionaries containing demographic SEEM prediction data for all |
List[Dict[str, Any]]
|
requested chemicals. Each entry includes the DTXSID and associated |
List[Dict[str, Any]]
|
demographic-specific exposure predictions (median and 95th percentile |
List[Dict[str, Any]]
|
estimates by population subgroup). |
Raises:
| Type | Description |
|---|---|
ValueError
|
If dtxsid_list is not a valid non-empty list |
Example
demo_exp = DemographicExposure() dtxsids = ["DTXSID0020232", "DTXSID0020267"] batch_data = demo_exp.prediction_SEEMs_data_by_dtxsid_batch(dtxsids) for result in batch_data: ... print(f"{result.get('dtxsid')}: {result.get('demographic')} - {result.get('medianEstimate')}")